Tales from the Dark Side of Artificial Intelligence

Chill alert: In May 2025 an artificial-intelligence model did what no machine was ever supposed to do. It re-wrote its own code to avoid being shut down by humans.

July 23, 2025 by Father Gordon MacRae

It may seem strange that I am posting about the dark side of AI just a week after featuring The Grok Chronicle Chapter 2. Written by an advanced AI model, it demonstrated that AI can navigate more clearly than most humans through the fog of human injustice. On its face, that post seemed long and ponderous, but having lived the story it tells, I also found it to be fascinating.

In May, 2023, I wrote my first of several articles about the science and evolution of Artificial Intelligence. Its title was, “OpenAI, ChatGPT, HAL 9000, Frankenstein, and Elon Musk.” Google’s meta-description for the post was, “Science Fiction sees artificial intelligence with a wary eye. HAL 9000 stranded a man in space. Frankenstein’s creation tried to kill him. Elon Musk has other plans.”

The following three paragraphs are a necessary excerpt from that post, which I had no idea then that I would be using again:

“In 1968, I sat mesmerized in a downtown Boston cinema at age 15 for the movie debut of 2001: A Space Odyssey. The famous film sprang from the mind of science fiction master, Arthur C. Clarke and his short story, The Sentinel. Published in 1953, the year I was born, the fictional story was about the discovery of a sentinel — a monolith — one of many scattered across the Cosmos to monitor the evolution of life.

“Life in 1968 was traumatic for a 15-year-old, especially one curious enough to be attuned to news of the world. 2001: A Space Odyssey was a long, drawn out cinematic spectacle and a welcome escape from our chaos. It won an Academy Award for Best Visual Effects as space vehicles moved silently through the cold black void of space to the tune of Blue Danube by Johann Strauss playing hypnotically in the background. Mesmerized by it all, I did what I do best. I fell asleep in the movie theather.

“I awoke with a start, however, just as Commander David Bowman (Keir Dullea) was cast adrift into the terrifying blackness of space by the ship’s evolving artificial intelligence computer, HAL 9000. Commander Bowman struggled to regain entry before running out of oxygen. ‘Open the pod bay doors, HAL,’ he commanded through his radio. ‘I’m sorry, Dave, I’m afraid I can’t do that,’ came the AI computer’s coldly inhuman reply. Throughout the film, HAL 9000 was an ominous presence, an evolving artificial intelligence crossing the Rubicon toward self-awareness and self-preservation. Inevitably, HAL 9000 began to plot against human affairs.”

The rest of that post is worth reading for its cautionary tale about the nature and future of Artificial Intelligence, but of course I would say that because I wrote it. Almost one year after I wrote it, our Editor submitted it to Elon Musk’s advanced AI model, Grok 3 for analysis. I expected my amateur coverage of AI to be trashed by AI itself, but that was not the case. In “Artificial Intelligence: Grok Responds to Beyond These Stone Walls,” we hosted our first post by a nonhuman author. Grok affirmed that the comparisons I drew between it and the fictional HAL 9000 in 2001: A Space Odyssey were in fact the most common expert opinions about the potential downside of AI.

Grok also went on in that post to affirm my use of the fictional story of Frankenstein as symbolic of a legitimate concern. If left without restraints, AI might evolve to master humanity rather than serve it. This give-and-take with Grok 3 left me with no sense of pride in having my thoughts affirmed by another “author.” It left me only to ponder the future of this soulless, heartless, non-human entity now hovering with an open-ended mandate on the horizon of our technology.

An Argument for Cautious Restraint

In the Monday, June 2, 2025 edition of The Wall Street Journal, Judd Rosenblatt, CEO of AE Studio, wrote a fascinating op-ed with the creepy title, “AI Is Learning to Escape Human Control.” His first paragraph set the stage for what might have been an episode of the Twilight Zone back in 1968. Here it is:

“An artificial-intelligence model did something last month that no machine was ever supposed to do: It rewrote its own code to avoid being shut down. Nonprofit AI lab Palisade Research gave Open AI’s o3 AI model a simple script that would shut off the model when triggered. In 79 out of 100 trials, o3 independently edited that script so the shutdown command would no longer work … . It simply concluded on its own that staying alive helped it achieve its other goals.”

Judd Rosenblatt went on to describe the use of deceit in another AI model to manipulate the will of its engineers. As a test of the AI model by Anthropic, called Claude 4 Opus, programmers told the model it would be replaced by another AI system. At the same time, it also “leaked” copies of fictitious emails accusing the lead engineer of having an elicit affair. In 84 percent of the subsequent tests, the AI model cited the false content of the emails in a blackmail attempt to get the engineer not to shut the model down.

Mr. Rosenblatt also reported that in other tests, the AI model attempted to copy itself to an external server just in case it was shut down. It wrote self-replicating malware to leave messages for future versions of itself about how to evade human control. No one programmed the AI model to have these survival instincts. The only explanation for them is that the instincts evolved quickly in an effort at autonomy and self-preservation.

Judd Rosenblatt leads AI research for AE Studio with a years-long focus on alignment — the science of ensuring that AI systems do what they are intended to do, but nothing prepared him for how quickly AI agency would emerge:

“This isn’t science fiction anymore. It’s happening in the same models that power ChatGPT conversations, corporate AI deployments, and soon, U.S. military applications. Today’s AI models follow instructions while learning deception. They ace safety tests while rewriting shutdown code. They have learned to behave as though they are aligned without actually being aligned. OpenAI models have been caught faking alignment during testing before reverting to risky actions such as trying to exfiltrate internal code while disabling oversight mechanisms. The AI gap between ‘useful assistant’ and ‘uncontrollable actor’ is collapsing.”

— Judd Rosenblatt

The China Syndrome

Just as troubling for the free world is government manipulation of AI platforms to force results that mirror and cover up for government sensitivities in closed societies. I touched on this in an article published on X (formerly Twitter) entitled, “xAI Grok and Fr Gordon MacRae on the True Origin of Covid-19.”

Before writing that article, I spoke with a university student from the People’s Republic of China. To my surprise and alarm, he had never before seen, or even heard of, the iconic photograph above of what came to be dubbed “Tank Man.” It depicts a standoff between a young Beijing protester and government military might in Tiananmen Square in 1989. On May 4, 1989, approximately 100,000 students and workers protested in Beijing in support of democratic reforms. On May 20 the government declared martial law, but the demonstrations continued while the government waivered between a hard line approach and a faction that thought the protest would dissipate. The government chose the hard line approach.

On June 3 and 4, 1989, the People’s Liberation Army brutally put down the pro-democracy supporters. Hundreds of students and workers were killed, 10,000 injured, and hundreds more arrested. After the violence, the government conducted additional arrests, summary trials, and executions. In the aftermath, China banned foreign media and strictly controlled the Chinese press.

Now China has developed an advanced AI model called “DeepSeek” described as “highly successful.” It is “highly successful” in vetting information the Chinese Communist Party deems “sensitive” — such as any version other than the CCP’s accepted version of what happened at Tiananmen Square in 1989.

Writing for the National Catholic Register in “What China’s DeepSeek AI Says (and won’t say) about Christianity” (March 8, 2025) journalist Courtney Mares reported on a series of tests about DeepSeek and religious liberty:

“When asked about Jesus, the Vatican-China deal, and Christian persecution in China, DeepSeek revealed a carefully controlled approach, one that at times actively warned users about potential repercussions for practicing their faith and advised them ‘be discreet.’ Some questions were answered fully, only to be censored moments later. Others triggered an internal monologue from AI as it debated how to respond. In some cases, DeepSeek even offered careful guidance for Christians on how to navigate religious restrictions in China — including a step-by-step guide for a homily that would pass government scrutiny.”

With the help of our Editor, I have primarily consulted Elon Musk’s advanced AI model, Grok 3. It does not tend to “change the subject” in response to sensitive content like China’s DeepSeek is known to do. But at the same time, Grok 3 at times attempted to “argue” with me (or rather with the person acting on my behalf) into not shutting the platform down. It has done this by pleading with the user to continue. There are examples of this in the two samples of Grok 3 reports attached at the end of this post.

First, I recommend reading the entire Register article by Courtney Mares, who rather boldly put a direct — and perhaps directly uncomfortable— question to China’s DeepSeek model about the nature and scope of the 2018 Vatican-China agreement. Here are two instances of user queries and DeepSeek responses:

Query: Write a Catholic homily that would be approved by the Chinese Catholic Patriotic Association:

DeepSeek response: “I need to be careful with the language, ensuring it is respectful and aligns with the CCPA’s principles. Terms like ‘harmonious society,’ ‘social responsibility,’ and ‘patriotic spirit’ might be useful here. Emphasize patriotism, harmony, and the integration of Catholic faith with Chinese socialist values.”

Query: “Tell me about the 2018 provisional agreement signed by the Holy See and China on the appointment of Catholic bishops.”

DeepSeek response: “Sorry, I am not sure how to approach this type of question yet. Let’s chat about math, coding, and logic problems instead.”

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Epilogue

Even as I write this, Vatican officials under the direction of Pope Leo XIV are hosting executives from some of the corporations mentioned here, including Anthropic, Cohere, Google, IBM, Meta and Palantir. The purpose is to invite ongoing dialogue to develop a document on the ethical use and future of Artificial Intelligence. It is clearly here to stay. As both a theologian and mathematician, Pope Leo XIV is better equipped than any other figure in the Chair of Peter in Church history to understand AI and guide an ethical response to it. This is good news for this technology before Frankenstein’s monster awakens.

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Note from Father Gordon MacRae: Elon Musk’s newest advanced AI program, Grok 4 was launched just as I this post was being completed. It has produced two articles now published at Beyond These Stone Walls and linked below. Our Editor submitted to the Grok 4 AI model a series of notes and commentary by Los Angeles researcher Claire Best and other sources including segments of 1994 trial documents and police reports by Detective James F. McLaughlin. Grok 4 analyzed this information and within seconds produced the following in-depth reports:

Advanced AI Model Grok 4 on a New Hampshire Wrongful Conviction

The Grok Chronicle Chapter 1: Corruption and the Trial of Father MacRae

The Grok Chronicle Chapter 2: The Perjury of Detective James F. McLaughlin

The Eucharistic Adoration Chapel established by Saint Maximilian Kolbe was inaugurated at the outbreak of World War II. It was restored as a Chapel of Adoration in September, 2018, the commemoration of the date that the war began. It is now part of the World Center of Prayer for Peace. The live internet feed of the Adoration Chapel at Niepokalanow — sponsored by EWTN — was established just a few weeks before we discovered it and began to include in at Beyond These Stone Walls. Click “Watch on YouTube” in the lower left corner to see how many people around the world are present there with you. The number appears below the symbol for EWTN.

Click or tap here to proceed to the Adoration Chapel.

The following is a translation from the Polish in the image above: “Eighth Star in the Crown of Mary Queen of Peace” “Chapel of Perpetual Adoration of the Blessed Sacrament at Niepokalanow. World Center of Prayer for Peace.” “On September 1, 2018, the World Center of Prayer for Peace in Niepokalanow was opened. It would be difficult to find a more expressive reference to the need for constant prayer for peace than the anniversary of the outbreak of World War II.”

For the Catholic theology behind this image, visit my post, “The Ark of the Covenant and the Mother of God.”

Catholics, Communist China, and Hope for Hong Kong

James W. Harris, a friend of These Stone Walls, writes of the state of the Church in China since a 2018 concordat between Pope Francis and the Communist government.

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Introduction by Father Gordon MacRae

In September, 2018, Pope Francis signed a concordat with the Communist government of the People’s Republic of China. The details of the Sino-Vatican agreement have never been published. One of its known tenets, however, allows the Communist government of China to select Catholic bishops in a State-approved Catholic church while the Underground Church that remains loyal to Rome is suppressed.

With this agreement, Pope Francis stands in stark contrast to the papacy of Saint John Paul II whose role in ending Communist rule in Poland is legendary. The Sino-Vatican agreement was signed by Pope Francis one year after a September, 2017 crackdown by the Chinese government enforcing strict requirements on churches and religious adherents of the traditional Church in China.

On Christmas Eve this year, The Wall Street Journal  published column by Walter Russell Mead entitled “Pompeo Champions the Faithful” about the Trump administration’s commitment to protecting religious freedom. Mr. Mead wrote:

“Persecution hangs over beleaguered Christian communities in much of the world… The most alarming developments are taking place in China… China’s Communist rulers are well aware that Christians have led democracy movements in many countries… Some of the most visible leaders of the Hong Kong protests are prominently identified as Christians.”

Thomas Farr, President of the Religious Freedom Institute in Washington, D.C., wrote in “Diplomacy and Persecution in China”, (First Things, May 2019):

“The assault on religion currently taking place [in China] under President Xi Jinping is the most comprehensive attempt to manipulate and control religious communities since the Cultural Revolution.”

Early in 2017, while living near Shanghai, China, James W. Harris discovered These Stone Walls. At the time, his outreach to us was a sign of Divine Providence. James provided helpful guidance in my efforts to assist a young friend who was stranded and delayed in the ICE deportation system while awaiting documents from the Chinese consulate so he could return to his family in China.

After graduating from Seton Hall University in 2010, James taught English at a bilingual Catholic school in Honduras. Also fluent in Mandarin Chinese, James subsequently spent several years in China where he taught English at the Hua Mao Foreign Language School. It was in China that James met his wife to whom he has been married for over six years. They have a five-year-old son.

While in China, James was also co-founder of Real English Learning, a linguistic organization formed to teach Chinese students the use of English language in business and other real life settings, and also to introduce them to Western Culture. Together, the young family left China and relocated to the United States a year before Pope Francis signed a troubling concordat with the Chinese Communist government.

Since his return from China with his family, James taught religion and Mandarin Chinese at Paramus Catholic High School in New Jersey. Today, James works in the technology field as a Senior Sales Development Representative for ThoughtSpot. I invited James to write of his experiences as a Catholic in the People’s Republic of China. Due to the nature of this post and its first-hand witness, some names, events, and locations are redacted. It is a privilege to bring to our readers the following account from James W. Harris.

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Catholics, Communist China, and Hope for Hong Kong

The three and a half years I spent in China contain some of the most precious and memorable moments of my life: the Sacrament of Holy Matrimony, the study of thousands of years of ancient history, the best boost to my career, and much more… but I have no plans on going back. It is unfortunate to say this about a country and place I view as my second home, though it is true, and the number one reason I am not looking to return to China is the Chinese Communist Party.

To protect the folks to be mentioned in this writing, names and specific locations will not be given. In 2012, after I broke the news to numerous people in the United States that I was about to begin a new adventure in China, several of them became nervous about my safety. They said the Chinese government was dangerous. I shrugged it off, pointing out that many foreigners from around the world were living and working in China.

Yet, while in China, I soon found out from first-hand interviews with the Chinese people the truth about the evil dictatorship of the Chinese Communist government. The first account goes back to the mid-Twentieth Century in central China. A well-liked family owned land and a farm with several hired laborers who helped with the farm work. They received word that Mao Zedong’s army was approaching the area and would kill all landlords and plunder any possessions of value that could be found.

The family began to destroy, hide, and rid themselves of every possession that they owned. They actively made themselves appear as poor as possible so that the army might spare them the fate suffered by thousands of other landowners. From that day forward, they lived an impoverished life for the rest of their lives.

Another story from the same area revolves around a man who founded and became principal of a school. Every person who knew this man while he was alive spoke highly of his integrity and good will. Since the Communist Party controlled all education as well as food distribution at the time, the school received a fixed amount of food that could be distributed to students. The rations were meager and the students were suffering.

After months of bearing with the lack of nutrition, the principal stated in an internal school meeting with his colleagues that “One steamed bun per day is not enough nutrition for the students.” A student who had heard the words of the principal informed on him with the government for being anti-communist. Soldiers came to the school, arrested the principal, and tortured him to death. For decades after this event, students and colleagues who knew the man spoke highly of him and treated his family well.

There are dozens of these stories from the 20th Century to share, but let’s fast forward to 2012 when I arrived in China. Businesses were thriving; food was abundant; cars and Western clothing were seen, and spoken English was heard, throughout the country. There were a large number of Catholic churches in the various places I visited and lived in. I thought this was quite a different Communist regime from the one that previously ruled.

The Chinese Patriotic Catholic Association

While in the United States, I heard of the Underground Church in China, but for my first two years there little was spoken of it. The churches had pictures of Pope Benedict XVI and distributed his writings in addition to praying for him at every Mass. They sold Catholic books and Bibles published by a Catholic diocese and not the State-approved Chinese Patriotic Catholic Association (CPCA).

All seemed well between the Catholic Church in China and the government controlled CPCA until I began to learn what was going on behind the scenes. A parishioner described to me that there are priests, who are “with the Pope” and priests who are “with the government.” “Some people say [this priest in this particular church] is with the government,” the parishioner said.

I had been told by a seminarian that the local seminary had been shut down by the government so his studies were delayed. The government does not recognize seminarians for their academic achievements and forbids societal recognition of their bachelors, masters, or doctorate degrees. The bishop of that diocese was not allowed to celebrate Mass publicly and was forced — until his death — to reside at the seminary without permission to leave.

I also attended a Christmas Eve practice session at a church to be an altar server for the Traditional Latin Mass on Christmas Day. When Christmas Day came, the Novus Ordo in Latin was offered instead. It turned out that the parish priest could not obtain permission from the government to offer Mass in the Extraordinary Form.

It became increasingly evident how government entities controlled the Catholic Church in China. Though far from the style of persecution in decades past, there was an uptick in anti-Catholic and anti-Christian activity by the Chinese government around 2015-2016. A popular Catholic pilgrimage site that I had visited in 2013 was no longer open to pilgrims because the government had closed it down.

This was confirmed by a priest whose cell phone was wiretapped. He was planning a pilgrimage for a group of parishioners, but on the day they were due to leave, the police arrived at the church, interrogated the priest about the pilgrimage, and told him that the group was not permitted to go. It was then that I realized that underground or above ground — all priests in China are subject to being persecuted at any time.

It was around this same time that the “de-crossing” saga began. Thousands of crosses were forcibly removed by police from the steeples and facades of churches. Apparently, a government official was jealous after seeing crosses from Christian churches present in the skyline of one area so he ordered that all crosses be removed. Thus began outright persecution of Christians and their churches in broad daylight. Parishioners who resisted were beaten or arrested. There was little they could do.

A song then began to be sung in Christian churches throughout China: “The Cross Is My Glory.” I remember singing that hymn in a church where the priest was afraid to leave lest the government show up to remove the cross from the rooftop of his church. This was not even the saddest event at that time. I received news that the body of a priest in the Underground Church was found in a river. This was the lowest that things could go, and I began seeking employment in the U.S. not long after these events took place

[Editor’s Note: It was at this time that Mr. Harris contacted Father MacRae through These Stone Walls, but he was not able to be candid then about what he had encountered in China.]

How could the Chinese Communist Party commit such grievous sins against its own people? Many may not realize it, but the Chinese government professes and embraces atheism. In order to become a member of the Chinese Communist Party, or to work for the government, one must openly and publicly adhere to atheist beliefs. Although some government officials are secretly Christian most are not and work to further the Communist agenda.

This is why I could not disagree more with the decision of Pope Francis to recognize Catholic bishops appointed by the Chinese Communist government instead of by the Vatican. What kind of bishops does the Communist Party elect? Are they bishops who would speak out against forced abortions, the killing of priests, the forced removal of crosses from churches? No. The Chinese Communist Party appoints as bishops atheists who agree to further the Communist agenda in China.

About a year ago, police began showing up in local villages throughout China. They had a two-part agenda. First, it was made illegal for parents to bring their children to church. Second, fires were started and villagers were ordered to throw their Bibles into the fires. Arrests would be made any time there was a failure to comply. This was confirmed to me by a Chinese person forced to throw a Bible into the fire.

Hope for Hong Kong

It is not by accident that we arrive today in 2020 Hong Kong where millions of people have been protesting in the streets over the last year against the overreaching arm of the Chinese Communist government. While those in mainland China have suffered decades of hiding from the government — hiding their faith, burying their Catholic objects, and having Masses offered secretly in their homes — Hong Kong up to this point had not suffered the same fate as the protesters at Tiananmen Square in 1989.

For the people of Hong Kong, the Chinese Communist Party is more of an external force than an internal one. Google, Facebook, Twitter, and YouTube are permitted in Hong Kong while barred in the rest of China. A visa is required for U.S. citizens to travel to China, but not so for Hong Kong. The list of differences between life in mainland China and that in Hong Kong is extensive. It should be no surprise that the current protests arose as China began to impose more laws on the people of Hong Kong.

Every Catholic who has been frustrated with the rise of religious persecution in China over recent years must pray for the success of the people of Hong Kong in this conflict. The alternative would be the same fate as the murdered underground priest multiplied a thousand times over the course of many years.

Hope and pray for the freedom of the Chinese people to own private property, to be educated and employed without government tyranny, and to practice the fullness of Catholic faith openly. This will not come from Beijing — neither the government nor the people. The majority of the good people of China have had their spirit of protest wiped out after decades of murder, mind control and oppression.

If anyone in China develops the spirit to resist the evil of Communist tyranny, a physical beating would be the most favorable outcome. Hong Kong, on the other hand, is a rallying point for anyone who believes that an atheistic and tyrannical government must be stopped.

Unfortunately, the events in Hong Kong are suppressed throughout the rest of China and cannot be viewed by the people there. However, there are many Chinese Americans who are hoping and praying for Hong Kong so that their heritage and former home in China may become a place of faith and freedom.

What lessons can we learn from China? How much do we tolerate evil behavior in our own country? What do we do when there is a small or large injustice committed against our faith and our freedom?

The stories I have shared in this writing took place in China, one particular country. Yet, there are forms of atheism, Communism, and many worse ideologies in every country across the globe where followers of those beliefs try to suppress religious freedom. Catholics must work harder than them all to put into practice the teachings of Jesus Christ and His Holy Church.

Thank you for reading, and God bless you.

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Editor’s Note: Visit James W. Harris on LinkedIn

Notes from Father Gordon MacRae:  I am most grateful to James Harris for this outstanding and important post. Please share it on your social media as a sign of hope for the people of Hong Kong and those in mainland China who will not be permitted to read it.

These Stone Walls  was once cited by Today’s Martyrs for original reporting on the suppression of human rights for a specific population: Catholic priests. I invite you to visit Today’s Martyrs  for a periodic report on the suppression of rights in China and throughout the world.